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PFP: generating and comparing protein fingerprints |
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| (M. Mezei, Prot. Engng.,, 16, 713-715 (2003)) |
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PFP calculates a novel fingerprint for proteins and, optionally, compares
the fingerprints of two proteins for best match.

Comparison of the PDZ domain of the protein 1FC7 with the PDZ-domain containing protein 1QAV. Top graphs compare the fingerprint match with the RMSD of the best overlay at different alignments.